5AAS Protein Binding date Jul 28, 2015
title The Selective Autophagy Receptor Tax1bp1 Is Required For Aut Dependent Capture Of Cytosolic Salmonella Typhimurium
authors D.A.Tumbarello, P.T.Manna, M.Allen, M.Bycroft, J.Kendrick-Jones,
compound source
Molecule: Tax1-Binding Protein 1
Chain: A
Fragment: Residues 722-784
Synonym: Traf6-Binding Protein, Taxbp1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: C41
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Hltv
methodSolution NMR
ligand ZN enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (337 Kb) [Save to disk]
  • Biological Unit Coordinates (5aas.pdb1.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 5AAS
  • CSU: Contacts of Structural Units for 5AAS
  • Original NMR restraints for 5AAS from PDB
  • Retrieve 5AAS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5AAS from S2C, [Save to disk]
  • View 5AAS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5AAS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5aas from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5aas] [5aas_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5AAS: [ZnF_C2H2 ] by SMART
  • Other resources with information on 5AAS
  • Community annotation for 5AAS at PDBWiki (http://pdbwiki.org)

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