5CQD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GOL, ZN	enzyme
Gene Ontology	Chain Function Process Component A, C
Primary reference	Crystal Structure of the DNA Deaminase APOBEC3B Catalytic Domain., Shi K, Carpenter MA, Kurahashi K, Harris RS, Aihara H, J Biol Chem. 2015 Sep 28. pii: jbc.M115.679951. PMID:26416889

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (190 Kb) [Save to disk] Biological Unit Coordinates (5cqd.pdb1.gz) 93 Kb Biological Unit Coordinates (5cqd.pdb2.gz) 93 Kb LPC: Ligand-Protein Contacts for 5CQD CSU: Contacts of Structural Units for 5CQD Structure Factors (390 Kb) Retrieve 5CQD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5CQD from S2C, [Save to disk] Re-refined 5cqd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5CQD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5cqd] [5cqd_A] [5cqd_C] SWISS-PROT database:

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