5CQR Protein Binding date Jul 22, 2015
title Dimerization Of Elp1 Is Essential For Elongator Complex Asse
authors Z.Lin, H.Xu, F.Li, W.Diao, J.Long, Y.Shen
compound source
Molecule: Elongator Complex Protein 1
Chain: A
Fragment: Unp Residues 715-1332
Synonym: Elp1,Ikappab Kinase Complex-Associated Protein,Ikk Associated Protein,P150;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ikbkap, Elp1, Ikap
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 61 2 2
R_factor 0.221 R_Free 0.270
length a length b length c angle alpha angle beta angle gamma
73.020 73.020 479.508 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.02 Å

Primary referenceDimerization of elongator protein 1 is essential for Elongator complex assembly., Xu H, Lin Z, Li F, Diao W, Dong C, Zhou H, Xie X, Wang Z, Shen Y, Long J, Proc Natl Acad Sci U S A. 2015 Aug 25;112(34):10697-702. doi:, 10.1073/pnas.1502597112. Epub 2015 Aug 10. PMID:26261306
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (158 Kb) [Save to disk]
  • Biological Unit Coordinates (5cqr.pdb1.gz) 302 Kb
  • CSU: Contacts of Structural Units for 5CQR
  • Structure Factors (187 Kb)
  • Retrieve 5CQR in mmCIF format [Save to disk]
  • Re-refined 5cqr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5CQR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5CQR
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5cqr from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5cqr] [5cqr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5CQR
  • Community annotation for 5CQR at PDBWiki (http://pdbwiki.org)

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