5CYO	Hydrolase	date	Jul 30, 2015
title	High Resolution Septin 9 Gtpase Domain In Complex With Gdp
authors	S.S.Matos, D.A.Leonardo, H.M.Pereira, E.Horjales, A.P.U.Araujo, R.C.Garratt
compound		source
Molecule: Septin-9 Chain: A, B Synonym: Mll Septin-Like Fusion Protein Msf-A,Mll Septin-Li Protein,Ovarianbreast Septin,Ovbr Septin,Septin D1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Sept9, Kiaa0991, Msf Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Plasmid
symmetry	Space Group: P 1 21 1	R_factor 0.183 R_Free 0.228
crystal cell	length a length b length c angle alpha angle beta angle gamma 57.497 78.049 77.443 90.00 105.92 90.00
method	X-Ray Diffraction	resolution	2.04 Å
ligand	GDP, MG	enzyme
Gene Ontology	Chain Function Process Component A, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (184 Kb) [Save to disk] Biological Unit Coordinates (5cyo.pdb1.gz) 93 Kb Biological Unit Coordinates (5cyo.pdb2.gz) 86 Kb LPC: Ligand-Protein Contacts for 5CYO CSU: Contacts of Structural Units for 5CYO Structure Factors (345 Kb) Retrieve 5CYO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5CYO from S2C, [Save to disk] Re-refined 5cyo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5CYO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5CYO

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5cyo_A] [5cyo_B] [5cyo] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5CYO

Community annotation for 5CYO at PDBWiki (http://pdbwiki.org)

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