5DAA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand PLP enzyme
related structures by homologous chain: 4DAA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceEffects of the E177K mutation in D-amino acid transaminase. Studies on an essential coenzyme anchoring group that contributes to stereochemical fidelity., van Ophem PW, Peisach D, Erickson SD, Soda K, Ringe D, Manning JM, Biochemistry 1999 Jan 26;38(4):1323-31. PMID:9930994
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (5daa.pdb1.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 5DAA
  • CSU: Contacts of Structural Units for 5DAA
  • Likely Quarternary Molecular Structure file(s) for 5DAA
  • Structure Factors (205 Kb)
  • Retrieve 5DAA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DAA from S2C, [Save to disk]
  • Re-refined 5daa structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5DAA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5daa] [5daa_A] [5daa_B]
  • SWISS-PROT database: [P19938]

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