5DST date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SAH enzyme
Gene
Ontology
ChainFunctionProcessComponent
K, C, A, F, I, B, O, H, J, E, D, M, L, N, G


Primary referenceNovel helical assembly in arginine methyltransferase 8., Toma-Fukai S, Kim JD, Park KE, Kuwabara N, Shimizu N, Krayukuhina E, Uchiyama S, Fukamizu A, Shimizu T, J Mol Biol. 2016 Feb 11. pii: S0022-2836(16)00112-1. doi:, 10.1016/j.jmb.2016.02.007. PMID:26876602
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (784 Kb) [Save to disk]
  • Biological Unit Coordinates (5dst.pdb1.gz) 118 Kb
  • Biological Unit Coordinates (5dst.pdb2.gz) 118 Kb
  • Biological Unit Coordinates (5dst.pdb3.gz) 119 Kb
  • Biological Unit Coordinates (5dst.pdb4.gz) 118 Kb
  • Biological Unit Coordinates (5dst.pdb5.gz) 119 Kb
  • Biological Unit Coordinates (5dst.pdb6.gz) 119 Kb
  • Biological Unit Coordinates (5dst.pdb7.gz) 119 Kb
  • Biological Unit Coordinates (5dst.pdb8.gz) 119 Kb
  • LPC: Ligand-Protein Contacts for 5DST
  • CSU: Contacts of Structural Units for 5DST
  • Structure Factors (2864 Kb)
  • Retrieve 5DST in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DST from S2C, [Save to disk]
  • Re-refined 5dst structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5DST in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dst_I] [5dst] [5dst_A] [5dst_B] [5dst_C] [5dst_D] [5dst_E] [5dst_F] [5dst_G] [5dst_H] [5dst_J] [5dst_K] [5dst_L] [5dst_M] [5dst_N] [5dst_O]
  • SWISS-PROT database:

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science