5DTC		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene	H781
Primary reference	The Crystal Structure of the Ubiquitin-Like Domain of Ribosome Assembly Factor Ytm1 and Characterization of its Interaction with the AAA-ATPase Midasin., Romes EM, Sobhany M, Stanley RE, J Biol Chem. 2015 Nov 24. pii: jbc.M115.693259. PMID:26601951

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk] Biological Unit Coordinates (5dtc.pdb1.gz) 31 Kb Biological Unit Coordinates (5dtc.pdb2.gz) 31 Kb CSU: Contacts of Structural Units for 5DTC Structure Factors (315 Kb) Retrieve 5DTC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5DTC from S2C, [Save to disk] Re-refined 5dtc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DTC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5dtc] [5dtc_A] [5dtc_B] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---