5E6H date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AKG, GOL, MN enzyme
Primary referenceCharacterization of a linked Jumonji domain of the KDM5/JARID1 family of histone H3 lysine 4 demethylases., Horton JR, Engstrom A, Zoeller EL, Liu X, Shanks JR, Zhang X, Johns MA, Vertino PM, Fu H, Cheng X, J Biol Chem. 2015 Dec 8. pii: jbc.M115.698449. PMID:26645689
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk]
  • Biological Unit Coordinates (5e6h.pdb1.gz) 100 Kb
  • LPC: Ligand-Protein Contacts for 5E6H
  • CSU: Contacts of Structural Units for 5E6H
  • Structure Factors (136 Kb)
  • Retrieve 5E6H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5E6H from S2C, [Save to disk]
  • Re-refined 5e6h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5E6H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5e6h] [5e6h_A]
  • SWISS-PROT database:
  • Domains found in 5E6H: [JmjC] [JmjN ] by SMART

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