5EN1 Rna Binding Protein Rna date Nov 09, 2015
title Crystal Structure Of Hnrnpa2b1 In Complex With Rna
authors B.X.Wu, S.C.Su, J.B.Ma
compound source
Molecule: Heterogeneous Nuclear Ribonucleoproteins A2b1
Chain: A
Fragment: Unp Residues 12-195
Synonym: Hnrnp A2b1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hnrnpa2b1, Hnrpa2b1
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Rna (5'-R(Apgpgpapcpupg)-3')
Chain: B
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
symmetry Space Group: C 1 2 1
R_factor 0.192 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
122.623 46.380 37.516 90.00 96.02 90.00
method X-Ray Diffractionresolution 2.58 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (5en1.pdb1.gz) 34 Kb
  • CSU: Contacts of Structural Units for 5EN1
  • Structure Factors (137 Kb)
  • Retrieve 5EN1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EN1 from S2C, [Save to disk]
  • Re-refined 5en1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EN1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5EN1
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5en1 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5en1_A] [5en1] [5en1_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5EN1: [RRM ] by SMART
  • Other resources with information on 5EN1
  • Community annotation for 5EN1 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science