5GKS date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand PO4 enzyme
Primary referenceClonal evolution and antigen recognition of anti-nuclear antibodies in acute systemic lupus erythematosus., Sakakibara S, Arimori T, Yamashita K, Jinzai H, Motooka D, Nakamura S, Li S, Takeda K, Katayama J, El Hussien MA, Narazaki M, Tanaka T, Standley DM, Takagi J, Kikutani H, Sci Rep. 2017 Nov 27;7(1):16428. doi: 10.1038/s41598-017-16681-y. PMID:29180749
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (267 Kb) [Save to disk]
  • Biological Unit Coordinates (5gks.pdb1.gz) 133 Kb
  • Biological Unit Coordinates (5gks.pdb2.gz) 131 Kb
  • LPC: Ligand-Protein Contacts for 5GKS
  • CSU: Contacts of Structural Units for 5GKS
  • Structure Factors (1086 Kb)
  • Retrieve 5GKS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GKS from S2C, [Save to disk]
  • Re-refined 5gks structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5GKS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gks_A] [5gks_B] [5gks_C] [5gks_D]
  • SWISS-PROT database:

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science