5GMH date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAG, RX8, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceStructural Analysis Reveals that Toll-like Receptor 7 Is a Dual Receptor for Guanosine and Single-Stranded RNA., Zhang Z, Ohto U, Shibata T, Krayukhina E, Taoka M, Yamauchi Y, Tanji H, Isobe T, Uchiyama S, Miyake K, Shimizu T, Immunity. 2016 Oct 18;45(4):737-748. doi: 10.1016/j.immuni.2016.09.011. Epub 2016, Oct 11. PMID:27742543
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (277 Kb) [Save to disk]
  • Biological Unit Coordinates (5gmh.pdb1.gz) 267 Kb
  • LPC: Ligand-Protein Contacts for 5GMH
  • CSU: Contacts of Structural Units for 5GMH
  • Structure Factors (2251 Kb)
  • Retrieve 5GMH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GMH from S2C, [Save to disk]
  • Re-refined 5gmh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5GMH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gmh] [5gmh_A] [5gmh_B]
  • SWISS-PROT database:
  • Domains found in 5GMH: [LRR] [LRRCT] [LRRNT] [LRR_TYP ] by SMART

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