OCA Atlas for 5HKK

5HKK

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ADP, ATP, GOL, MG, PO4

enzyme

Gene

CATHTA2 ; CATHTA2 ; CATHTA2 ; CATHTA2

Gene
Ontology

Chain	Function	Process	Component
J, A, I, B, C, K
L, F, N, E, M, D
O, G
P, H

Primary reference

Regulation of the thermoalkaliphilic F1-ATPase from Caldalkalibacillus thermarum., Ferguson SA, Cook GM, Montgomery MG, Leslie AG, Walker JE, Proc Natl Acad Sci U S A. 2016 Sep 27;113(39):10860-5. doi:, 10.1073/pnas.1612035113. Epub 2016 Sep 12. PMID:27621435

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (999 Kb) [Save to disk]

Biological Unit Coordinates (5hkk.pdb1.gz) 502 Kb

Biological Unit Coordinates (5hkk.pdb2.gz) 501 Kb

LPC: Ligand-Protein Contacts for 5HKK

CSU: Contacts of Structural Units for 5HKK

Structure Factors (3211 Kb)

Retrieve 5HKK in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5HKK from S2C, [Save to disk]

Re-refined 5hkk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5HKK in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5hkk] [5hkk_A] [5hkk_B] [5hkk_C] [5hkk_D] [5hkk_E] [5hkk_F] [5hkk_G] [5hkk_H] [5hkk_I] [5hkk_J] [5hkk_K] [5hkk_L] [5hkk_M] [5hkk_N] [5hkk_O] [5hkk_P]

SWISS-PROT database:

Domain found in 5HKK: [AAA ] by SMART

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