5I6S Hydrolase date Feb 16, 2016
title Crystal Structure Of An Endoglucanase From Penicillium Verru
authors V.Nemashklaov, A.Vakhrusheva, S.Tishchenko, A.Gabdulkhakov, O.Kr A.Gusakov, A.Sinitsyn
compound source
Molecule: Endoglucanase
Chain: A
Organism_scientific: Talaromyces Verruculosus
Organism_taxid: 198730
symmetry Space Group: P 41 21 2
R_factor 0.218 R_Free 0.260
length a length b length c angle alpha angle beta angle gamma
83.819 83.819 89.044 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand BMA, NAG enzyme

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (5i6s.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 5I6S
  • CSU: Contacts of Structural Units for 5I6S
  • Structure Factors (229 Kb)
  • Retrieve 5I6S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5I6S from S2C, [Save to disk]
  • Re-refined 5i6s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5I6S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5I6S
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5i6s from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5i6s_A] [5i6s]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5I6S
  • Community annotation for 5I6S at PDBWiki (http://pdbwiki.org)

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