5IFS date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ADP, EDO, GOL, MG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, D


Primary referenceQuantitative interaction mapping reveals an extended UBX domain in ASPL that disrupts functional p97 hexamers., Arumughan A, Roske Y, Barth C, Forero LL, Bravo-Rodriguez K, Redel A, Kostova S, McShane E, Opitz R, Faelber K, Rau K, Mielke T, Daumke O, Selbach M, Sanchez-Garcia E, Rocks O, Panakova D, Heinemann U, Wanker EE, Nat Commun. 2016 Oct 20;7:13047. doi: 10.1038/ncomms13047. PMID:27762274
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (213 Kb) [Save to disk]
  • Biological Unit Coordinates (5ifs.pdb1.gz) 206 Kb
  • LPC: Ligand-Protein Contacts for 5IFS
  • CSU: Contacts of Structural Units for 5IFS
  • Structure Factors (507 Kb)
  • Retrieve 5IFS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IFS from S2C, [Save to disk]
  • Re-refined 5ifs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5IFS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ifs] [5ifs_A] [5ifs_B] [5ifs_C] [5ifs_D]
  • SWISS-PROT database:
  • Domains found in 5IFS: [AAA] [CDC48_2] [CDC48_N] [UBX ] by SMART

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