5IG3 Transferase date Feb 26, 2016
title Crystal Structure Of The Human Camkii-Alpha Hub
authors E.Mcspadden, Y.M.Cao, M.Bhattacharyya, C.L.Gee, T.Barros, J.Kuriy
compound source
Molecule: Calciumcalmodulin-Dependent Protein Kinase Type Alpha;
Chain: A, B, C, D, E, F
Fragment: Unp Residues 345-475
Synonym: Camk-II Subunit Alpha
Ec: 2.7.11.17
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Camk2a, Camka, Kiaa0968
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43 21 2
R_factor 0.220 R_Free 0.268
crystal
cell
length a length b length c angle alpha angle beta angle gamma
89.888 89.888 226.577 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.75 Å
ligand
enzyme Transferase E.C.2.7.11.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceMolecular mechanism of activation-triggered subunit exchange in Ca(2+)/calmodulin-dependent protein kinase II., Bhattacharyya M, Stratton MM, Going CC, McSpadden ED, Huang Y, Susa AC, Elleman A, Cao YM, Pappireddi N, Burkhardt P, Gee CL, Barros T, Schulman H, Williams ER, Kuriyan J, Elife. 2016 Mar 7;5. pii: e13405. doi: 10.7554/eLife.13405. PMID:26949248
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (281 Kb) [Save to disk]
  • Biological Unit Coordinates (5ig3.pdb1.gz) 547 Kb
  • CSU: Contacts of Structural Units for 5IG3
  • Structure Factors (1571 Kb)
  • Retrieve 5IG3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IG3 from S2C, [Save to disk]
  • Re-refined 5ig3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5IG3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5IG3
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5ig3 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ig3_B] [5ig3_C] [5ig3_E] [5ig3_A] [5ig3_F] [5ig3_D] [5ig3]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5IG3
  • Community annotation for 5IG3 at PDBWiki (http://pdbwiki.org)

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