5KZW Hydrolase date Jul 25, 2016
title Crystal Structure Of Human Gaa
authors D.T.Deming, S.C.Garman
compound source
Molecule: Lysosomal Alpha-Glucosidase
Chain: A
Fragment: Unp Residues 79-952
Synonym: Acid Maltase,Aglucosidase Alfa
Ec: 3.2.1.20
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gaa
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
Expression_system_cell_line: Cho Cells
symmetry Space Group: P 21 21 21
R_factor 0.154 R_Free 0.185
crystal
cell
length a length b length c angle alpha angle beta angle gamma
97.110 102.590 128.550 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand BGC, BMA, EDO, FCA, GLC, NAG, PEG, PGE, SO4 enzyme Hydrolase E.C.3.2.1.20 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • alpha-1,4-glucosidase activi...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (290 Kb) [Save to disk]
  • Biological Unit Coordinates (5kzw.pdb1.gz) 283 Kb
  • LPC: Ligand-Protein Contacts for 5KZW
  • CSU: Contacts of Structural Units for 5KZW
  • Structure Factors (580 Kb)
  • Retrieve 5KZW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5KZW from S2C, [Save to disk]
  • Re-refined 5kzw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5KZW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5KZW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5kzw from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5kzw_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5KZW
  • Community annotation for 5KZW at PDBWiki (http://pdbwiki.org)

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