5N9C Cell Adhesion date Feb 24, 2017
title Enah Evh1 In Complex With Ac-[2-Cl-F]-Pp-[Prom-1]-Oh
authors M.Barone, Y.Roske
compound source
Molecule: Protein Enabled Homolog
Chain: A, B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Enah, Mena
Expression_system: Escherichia Coli
Expression_system_taxid: 866768
Expression_system_strain: Bl21-Gold(De3)Plyss Ag
Expression_system_plasmid: Pgex-4t-1

Molecule: Ac-[2-Cl-F]-Pp-[Prom-1]-Oh
Chain: F, G, H, M
Engineered: Yes

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
symmetry Space Group: P 1
R_factor 0.139 R_Free 0.169
length a length b length c angle alpha angle beta angle gamma
34.761 43.386 43.593 61.40 84.03 84.10
method X-Ray Diffractionresolution 1.16 Å
ligand 2L5, 92B, ACE, GOL, NO3, SO4 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk]
  • Biological Unit Coordinates (5n9c.pdb1.gz) 138 Kb
  • LPC: Ligand-Protein Contacts for 5N9C
  • CSU: Contacts of Structural Units for 5N9C
  • Structure Factors (481 Kb)
  • Retrieve 5N9C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5N9C from S2C, [Save to disk]
  • Re-refined 5n9c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5N9C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5N9C
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5n9c from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5n9c_H] [5n9c_G] [5n9c_B] [5n9c_F] [5n9c_A] [5n9c_M]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5N9C
  • Community annotation for 5N9C at PDBWiki (http://pdbwiki.org)

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