5NNZ Transport Protein date Apr 10, 2017
title Crystal Structure Of Human Oda16
authors E.Lorentzen, T.Taschner, J.Basquin
compound source
Molecule: Dynein Assembly Factor With Wdr Repeat Domains 1
Chain: B, A
Fragment: Unp Residues 1-415
Synonym: Outer Row Dynein Assembly Protein 16 Homolog,Wd Re Containing Protein 69;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Daw1, Wdr69
Expression_system: Unidentified Baculovirus
Expression_system_taxid: 10469
symmetry Space Group: P 1 21 1
R_factor 0.226 R_Free 0.284
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.150 69.500 102.150 90.00 90.01 90.00
method X-Ray Diffractionresolution 2.65 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk]
  • Biological Unit Coordinates (5nnz.pdb1.gz) 54 Kb
  • Biological Unit Coordinates (5nnz.pdb2.gz) 53 Kb
  • CSU: Contacts of Structural Units for 5NNZ
  • Structure Factors (398 Kb)
  • Retrieve 5NNZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5NNZ from S2C, [Save to disk]
  • Re-refined 5nnz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5NNZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5NNZ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5nnz from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5nnz_A] [5nnz_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5NNZ
  • Community annotation for 5NNZ at PDBWiki (http://pdbwiki.org)

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