5TDK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SR enzyme
Primary referenceStructural insights into RNA duplexes with multiple 2'-5'-linkages., Shen F, Luo Z, Liu H, Wang R, Zhang S, Gan J, Sheng J, Nucleic Acids Res. 2016 Dec 29. pii: gkw1307. doi: 10.1093/nar/gkw1307. PMID:28034958
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (5tdk.pdb1.gz) 20 Kb
  • LPC: Ligand-Protein Contacts for 5TDK
  • CSU: Contacts of Structural Units for 5TDK
  • Structure Factors (109 Kb)
  • Retrieve 5TDK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TDK from S2C, [Save to disk]
  • Re-refined 5tdk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5TDK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tdk] [5tdk_A] [5tdk_B]
  • SWISS-PROT database:

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