5UV6 Cell Adhesion date Feb 19, 2017
title Crystal Structure Of Human Opioid Binding Proteincell Adhes Molecule Like (Opcml)
authors J.R.Birtley, L.J.Stern, H.Gabra, E.Zanini
compound source
Molecule: Opioid-Binding Proteincell Adhesion Molecule
Chain: A, B
Synonym: Opioid-Binding Cell Adhesion Molecule,Iglon Family
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Opcml, Iglon1, Obcam
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
symmetry Space Group: P 41 21 2
R_factor 0.284 R_Free 0.300
length a length b length c angle alpha angle beta angle gamma
93.564 93.564 262.158 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.65 Å
ligand BMA, NAG enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (189 Kb) [Save to disk]
  • Biological Unit Coordinates (5uv6.pdb1.gz) 182 Kb
  • LPC: Ligand-Protein Contacts for 5UV6
  • CSU: Contacts of Structural Units for 5UV6
  • Structure Factors (1233 Kb)
  • Retrieve 5UV6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5UV6 from S2C, [Save to disk]
  • View 5UV6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5UV6
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5uv6 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5uv6_B] [5uv6_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5UV6
  • Community annotation for 5UV6 at PDBWiki (http://pdbwiki.org)

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