5V4K		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GOL, SO4	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	Insights into links between autophagy and the ubiquitin system from the structure of LC3B bound to the LIR motif from the E3 ligase NEDD4., Qiu Y, Zheng Y, Wu KP, Schulman BA, Protein Sci. 2017 May 3. doi: 10.1002/pro.3186. PMID:28470758

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk] Biological Unit Coordinates (5v4k.pdb1.gz) 85 Kb LPC: Ligand-Protein Contacts for 5V4K CSU: Contacts of Structural Units for 5V4K Structure Factors (480 Kb) Retrieve 5V4K in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5V4K from S2C, [Save to disk] Re-refined 5v4k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5V4K in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5v4k_A] [5v4k_B] [5v4k] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---