5VDK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 8X7, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis of Wee kinases functionality and inactivation by diverse small molecule inhibitors., Zhu JY, Cuellar RAD, Berndt N, Lee HE, Olesen SH, Martin MP, Jensen JT, Georg GI, Schonbrunn E, J Med Chem. 2017 Aug 9. doi: 10.1021/acs.jmedchem.7b00996. PMID:28792760
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk]
  • Biological Unit Coordinates (5vdk.pdb1.gz) 87 Kb
  • LPC: Ligand-Protein Contacts for 5VDK
  • CSU: Contacts of Structural Units for 5VDK
  • Structure Factors (69 Kb)
  • Retrieve 5VDK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VDK from S2C, [Save to disk]
  • View 5VDK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vdk_A]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science