5W10 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CMP, MSE enzyme
Primary referenceStructural and Enzymatic Characterization of a cAMP-Dependent Diguanylate Cyclase from Pathogenic Leptospira Species., da Costa Vasconcelos FN, Maciel NK, Favaro DC, de Oliveira LC, Barbosa AS, Salinas RK, de Souza RF, Farah CS, Guzzo CR, J Mol Biol. 2017 Jul 21;429(15):2337-2352. doi: 10.1016/j.jmb.2017.06.002. Epub, 2017 Jun 7. PMID:28601495
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (127 Kb) [Save to disk]
  • Biological Unit Coordinates (5w10.pdb1.gz) 62 Kb
  • Biological Unit Coordinates (5w10.pdb2.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 5W10
  • CSU: Contacts of Structural Units for 5W10
  • Structure Factors (2040 Kb)
  • Retrieve 5W10 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5W10 from S2C, [Save to disk]
  • Re-refined 5w10 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5W10 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5w10_A] [5w10_B] [5w10_C] [5w10_D]
  • SWISS-PROT database:

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