5W6J date
compound source
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SO4 enzyme
F, C, R, J, H, I, M, T, Q, E, D, P, U, O, A, N, G, K, L, B

Primary referenceStructural analysis reveals a pyruvate-binding activator site in the Agrobacterium tumefaciens ADP-glucose pyrophosphorylase., Hill BL, Mascarenhas R, Patel HP, Asencion Diez MD, Wu R, Iglesias AA, Liu D, Ballicora MA, J Biol Chem. 2018 Nov 6. pii: RA118.004246. doi: 10.1074/jbc.RA118.004246. PMID:30401744
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2852 Kb) [Save to disk]
  • Biological Unit Coordinates (5w6j.pdb1.gz) 578 Kb
  • Biological Unit Coordinates (5w6j.pdb2.gz) 581 Kb
  • Biological Unit Coordinates (5w6j.pdb3.gz) 578 Kb
  • Biological Unit Coordinates (5w6j.pdb4.gz) 584 Kb
  • Biological Unit Coordinates (5w6j.pdb5.gz) 580 Kb
  • LPC: Ligand-Protein Contacts for 5W6J
  • CSU: Contacts of Structural Units for 5W6J
  • Structure Factors (7156 Kb)
  • Retrieve 5W6J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5W6J from S2C, [Save to disk]
  • View 5W6J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5W6J
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5w6j from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5w6j_A] [5w6j_B] [5w6j_C] [5w6j_D] [5w6j_E] [5w6j_F] [5w6j_G] [5w6j_H] [5w6j_I] [5w6j_J] [5w6j_K] [5w6j_L] [5w6j_M] [5w6j_N] [5w6j_O] [5w6j_P] [5w6j_Q] [5w6j_R] [5w6j_T] [5w6j_U]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5W6J
  • Community annotation for 5W6J at PDBWiki (http://pdbwiki.org)

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