5Y2Z date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, CA, FUC, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
K, E, I, C, A, G


Primary referenceStructural basis of epilepsy-related ligand-receptor complex LGI1-ADAM22., Yamagata A, Miyazaki Y, Yokoi N, Shigematsu H, Sato Y, Goto-Ito S, Maeda A, Goto T, Sanbo M, Hirabayashi M, Shirouzu M, Fukata Y, Fukata M, Fukai S, Nat Commun. 2018 Apr 18;9(1):1546. doi: 10.1038/s41467-018-03947-w. PMID:29670100
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1618 Kb) [Save to disk]
  • Biological Unit Coordinates (5y2z.pdb1.gz) 278 Kb
  • Biological Unit Coordinates (5y2z.pdb2.gz) 277 Kb
  • Biological Unit Coordinates (5y2z.pdb3.gz) 275 Kb
  • Biological Unit Coordinates (5y2z.pdb4.gz) 272 Kb
  • Biological Unit Coordinates (5y2z.pdb5.gz) 280 Kb
  • Biological Unit Coordinates (5y2z.pdb6.gz) 281 Kb
  • LPC: Ligand-Protein Contacts for 5Y2Z
  • CSU: Contacts of Structural Units for 5Y2Z
  • Structure Factors (1876 Kb)
  • Retrieve 5Y2Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5Y2Z from S2C, [Save to disk]
  • View 5Y2Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5y2z_A] [5y2z_B] [5y2z_C] [5y2z_D] [5y2z_E] [5y2z_F] [5y2z_G] [5y2z_H] [5y2z_I] [5y2z_J] [5y2z_K] [5y2z_L]
  • SWISS-PROT database:

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