5Y6L	Ligase	date	Aug 12, 2017
title	A Subcomplex Crystal Structure Of Human Cytosolic Aspartyl-T Synthetase And Heterotetrameric Glutathione Transferase-Hom Domains In Multi-Trna Synthetase Complex
authors	H.Y.Cho, H.J.Lee, B.S.Kang
compound		source
Molecule: Methionine--Trna Ligase, Cytoplasmic Chain: A Fragment: Unp Residues 1-224, Mrs N-Terminus Domain Synonym: Methionyl-Trna Synthetase,Metrs Ec: 6.1.1.10 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mars Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Eukaryotic Translation Elongation Factor 1 Epsilo Chain: B Fragment: Aimp3 With Additional S Sequence At The N-Terminu Synonym: Aminoacyl Trna Synthetase Complex-Interacting Multifunctional Protein 3,Elongation Factor P18,Multisyntha Auxiliary Component P18; Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Eef1e1, Aimp3, P18 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)
Molecule: Bifunctional Glutamateproline--Trna Ligase Chain: C Fragment: Unp Residues 1-175, Eprs Gst-Like Domain Synonym: Bifunctional Aminoacyl-Trna Synthetase,Cell Prolif Inducing Gene 32 Protein,Glutamatyl-Prolyl-Trna Synthetase; Ec: 6.1.1.17 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Eprs, Glns, Pars, Qars, Qprs, Pig32 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Aminoacyl Trna Synthase Complex-Interacting Multi Protein 2; Chain: D Fragment: Unp Residues 90-320, Aimp2 Gst-Like Domain Synonym: Multisynthase Complex Auxiliary Component P38,Prot Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Aimp2, Jtv1, Pro0992 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Aspartate--Trna Ligase, Cytoplasmic Chain: E Synonym: Aspartyl-Trna Synthetase,Asprs,Cell Proliferation- Gene 40 Protein; Ec: 6.1.1.12 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dars, Pig40 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.177 R_Free 0.252
crystal cell	length a length b length c angle alpha angle beta angle gamma 84.535 98.413 125.919 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.90 Å
ligand	PO4	enzyme	Ligase E.C.6.1.1.10 BRENDA
Gene Ontology	Chain Function Process Component B D E

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk] Biological Unit Coordinates (5y6l.pdb1.gz) 130 Kb LPC: Ligand-Protein Contacts for 5Y6L CSU: Contacts of Structural Units for 5Y6L Structure Factors (626 Kb) Retrieve 5Y6L in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5Y6L from S2C, [Save to disk]

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Visual 3D analysis of 5Y6L

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5y6l_A] [5y6l_E] [5y6l_D] [5y6l_C] [5y6l_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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