5YAK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FMN, YOF enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, F, A, B, E, D
  • iodide peroxidase activity


  • Primary referenceRedox control of iodotyrosine deiodinase., Hu J, Su Q, Schlessman J, Rokita SE, Protein Sci. 2018 Jul 27. doi: 10.1002/pro.3479. PMID:30052294
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (229 Kb) [Save to disk]
  • Biological Unit Coordinates (5yak.pdb1.gz) 77 Kb
  • Biological Unit Coordinates (5yak.pdb2.gz) 77 Kb
  • Biological Unit Coordinates (5yak.pdb3.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 5YAK
  • CSU: Contacts of Structural Units for 5YAK
  • Structure Factors (2435 Kb)
  • Retrieve 5YAK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5YAK from S2C, [Save to disk]
  • View 5YAK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5yak_A] [5yak_B] [5yak_C] [5yak_D] [5yak_E] [5yak_F]
  • SWISS-PROT database:

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