5YFS date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, K, MPD, RI2 enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, A, B


Primary referenceA presumed homologue of the regulatory subunits of eIF2B functions as ribose-1,5-bisphosphate isomerase in Pyrococcus horikoshii OT3., Gogoi P, Kanaujia SP, Sci Rep. 2018 Jan 30;8(1):1891. doi: 10.1038/s41598-018-20418-w. PMID:29382938
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (171 Kb) [Save to disk]
  • Biological Unit Coordinates (5yfs.pdb1.gz) 327 Kb
  • LPC: Ligand-Protein Contacts for 5YFS
  • CSU: Contacts of Structural Units for 5YFS
  • Structure Factors (4223 Kb)
  • Retrieve 5YFS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5YFS from S2C, [Save to disk]
  • View 5YFS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5yfs_A] [5yfs_B] [5yfs_C]
  • SWISS-PROT database:

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