5YHN Hydrolase Inhibitor date Sep 29, 2017
title Solution Structure Of The Lekti Domain 4
authors Y.K.Mok, K.Ramesh
compound source
Molecule: Cdna Flj60407, Highly Similar To Serine Protease Kazal-Type 5;
Chain: A
Fragment: Domain 4
Synonym: Lekti
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Primary referenceHomologous Lympho-Epithelial Kazal-type Inhibitor Domains Delay Blood Coagulation by Inhibiting Factor X and XI with Differential Specificity., Ramesh K, Lama D, Tan KW, Nguyen VS, Chew FT, Verma CS, Mok YK, Structure. 2018 Jun 13. pii: S0969-2126(18)30205-3. doi:, 10.1016/j.str.2018.05.018. PMID:30017565
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (371 Kb) [Save to disk]
  • Biological Unit Coordinates (5yhn.pdb1.gz) 19 Kb
  • CSU: Contacts of Structural Units for 5YHN
  • Original NMR restraints for 5YHN from PDB
  • Retrieve 5YHN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5YHN from S2C, [Save to disk]
  • View 5YHN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5YHN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5yhn from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5yhn_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5YHN
  • Community annotation for 5YHN at PDBWiki (http://pdbwiki.org)

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