5ZRT Unknown Function date Apr 25, 2018
title Crystal Structure Of Human C1orf123 Protein
authors S.N.A.Rahaman, J.M.Yusop, Z.A.Mohamed-Hussein, A.Wan Mohd, K.L.H A.H.Teh, J.Waterman, C.L.Ng
compound source
Molecule: Upf0587 Protein C1orf123
Chain: A, B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: C1orf123
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.175 R_Free 0.220
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.320 65.350 95.050 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand BME, CL, GOL, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk]
  • Biological Unit Coordinates (5zrt.pdb1.gz) 56 Kb
  • Biological Unit Coordinates (5zrt.pdb2.gz) 56 Kb
  • LPC: Ligand-Protein Contacts for 5ZRT
  • CSU: Contacts of Structural Units for 5ZRT
  • Structure Factors (784 Kb)
  • Retrieve 5ZRT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ZRT from S2C, [Save to disk]
  • View 5ZRT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5ZRT
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5zrt from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5zrt_A] [5zrt_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5ZRT
  • Community annotation for 5ZRT at PDBWiki (http://pdbwiki.org)

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