5ZSH Immune System date Apr 28, 2018
title Crystal Structure Of Monkey Tlr7 In Complex With Cl075
authors Z.Zhang, U.Ohto, T.Shimizu
compound source
Molecule: Toll-Like Receptor 7
Chain: B, A
Fragment: Unp Residues 27-839
Engineered: Yes
Mutation: Yes
Organism_scientific: Macaca Mulatta
Organism_common: Rhesus Macaque
Organism_taxid: 9544
Gene: Tlr7
Expression_system: Drosophila Melanogaster
Expression_system_taxid: 7227
symmetry Space Group: P 21 21 21
R_factor 0.197 R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
99.742 139.661 150.437 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand L07, NAG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (267 Kb) [Save to disk]
  • Biological Unit Coordinates (5zsh.pdb1.gz) 257 Kb
  • LPC: Ligand-Protein Contacts for 5ZSH
  • CSU: Contacts of Structural Units for 5ZSH
  • Structure Factors (1823 Kb)
  • Retrieve 5ZSH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ZSH from S2C, [Save to disk]
  • View 5ZSH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5ZSH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5zsh_B] [5zsh_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5ZSH
  • Community annotation for 5ZSH at PDBWiki (http://pdbwiki.org)

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