6ANU Structural Protein date Aug 14, 2017
title Cryo-Em Structure Of F-Actin Complexed With The Beta-III-Spe Actin-Binding Domain
authors F.Wang, A.Orlova, A.W.Avery, T.S.Hays, E.H.Egelman
compound source
Molecule: Actin, Cytoplasmic 1
Chain: F, A, B, C, D, E
Synonym: Beta-Actin
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Actb
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Spectrin Beta Chain, Non-Erythrocytic 2
Chain: f, a, b, c, d, e
Synonym: Beta-III Spectrin,Spinocerebellar Ataxia 5 Protein
Engineered: Yes
Mutation: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sptbn2, Kiaa0302, Sca5
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 7.00 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceStructural basis for high-affinity actin binding revealed by a beta-III-spectrin SCA5 missense mutation., Avery AW, Fealey ME, Wang F, Orlova A, Thompson AR, Thomas DD, Hays TS, Egelman EH, Nat Commun. 2017 Nov 7;8(1):1350. doi: 10.1038/s41467-017-01367-w. PMID:29116080
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (428 Kb) [Save to disk]
  • Biological Unit Coordinates (6anu.pdb1.gz) 420 Kb
  • CSU: Contacts of Structural Units for 6ANU
  • Retrieve 6ANU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6ANU from S2C, [Save to disk]
  • View 6ANU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6ANU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6anu from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6anu_A] [6anu_E] [6anu_e] [6anu_a] [6anu_F] [6anu_d] [6anu_b] [6anu_c] [6anu_D] [6anu_B] [6anu_C] [6anu_f]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6ANU
  • Community annotation for 6ANU at PDBWiki (http://pdbwiki.org)

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