6B1A Transferase Transferase Inhibitor date Sep 18, 2017
title Structure Of Human Nnmt In Complex With Bisubstrate Inhibito
authors N.Babault, J.Liu, J.Jin
compound source
Molecule: Nicotinamide N-Methyltransferase
Chain: A, B, C, D
Ec: 2.1.1.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nnmt
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3) Codon Plus Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a-Lic
symmetry Space Group: P 1
R_factor 0.170 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.440 62.560 107.979 91.76 98.05 111.83
method X-Ray Diffractionresolution 2.30 Å
ligand C8J, EDO enzyme Transferase E.C.2.1.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceDiscovery of Bisubstrate Inhibitors of Nicotinamide N-Methyltransferase (NNMT)., Babault N, Allali-Hassani A, Li F, Fan J, Yue A, Ju K, Liu F, Vedadi M, Liu J, Jin J, J Med Chem. 2018 Jan 10. doi: 10.1021/acs.jmedchem.7b01422. PMID:29320176
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (341 Kb) [Save to disk]
  • Biological Unit Coordinates (6b1a.pdb1.gz) 89 Kb
  • Biological Unit Coordinates (6b1a.pdb2.gz) 89 Kb
  • Biological Unit Coordinates (6b1a.pdb3.gz) 82 Kb
  • Biological Unit Coordinates (6b1a.pdb4.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 6B1A
  • CSU: Contacts of Structural Units for 6B1A
  • Structure Factors (1998 Kb)
  • Retrieve 6B1A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6B1A from S2C, [Save to disk]
  • View 6B1A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6B1A
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6b1a from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6b1a_A] [6b1a_D] [6b1a_C] [6b1a_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6B1A
  • Community annotation for 6B1A at PDBWiki (http://pdbwiki.org)

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