6C23	Gene Regulation	date	Jan 05, 2018
title	Cryo-Em Structure Of Prc2 Bound To Cofactors Aebp2 And Jarid Compact Active State
authors	V.Kasinath, M.Faini, S.Poepsel, D.Reif, A.Feng, G.Stjepanovic, R.A E.Nogales
compound		source
Molecule: Polycomb Protein Suz12 Chain: A, M, Q Synonym: Chromatin Precipitated E2f Target 9 Protein,Chet 9 Joined To Jazf1 Protein,Suppressor Of Zeste 12 Protein Homo Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Suz12, Chet9, Jjaz1, Kiaa0160 Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Protein Jumonji Chain: E Synonym: Jumonjiarid Domain-Containing Protein 2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Jarid2, Jmj Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Histone-Lysine N-Methyltransferase Ezh2 Chain: K, C Synonym: Enx-1,Enhancer Of Zeste Homolog 2,Lysine N-Methylt 6; Ec: 2.1.1.43 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ezh2, Kmt6 Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Polycomb Protein Eed Chain: L Synonym: Heed,Embryonic Ectoderm Development Protein,Wd Pro Associating With Integrin Cytoplasmic Tails 1,Wait-1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Eed Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Histone-Binding Protein Rbbp4 Chain: N Synonym: Chromatin Assembly Factor 1 Subunit C,Caf-1 Subuni Chromatin Assembly Factor I P48 Subunit,Caf-I P48,Nucleosom Remodeling Factor Subunit Rbap48,Retinoblastoma-Binding Pro Rbbp-4,Retinoblastoma-Binding Protein P48; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rbbp4, Rbap48 Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Jarid2-Substrate Chain: O Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Zinc Finger Protein Aebp2 Chain: P Synonym: Adipocyte Enhancer-Binding Protein 2,Ae-Binding Pr Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Aebp2 Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Suz12 Chain: Z Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
Molecule: Protein Jumonji Chain: B Synonym: Jumonjiarid Domain-Containing Protein 2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Jarid2, Jmj Expression_system: Trichoplusia Ni Expression_system_taxid: 7111
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	3.90 Å
ligand	M3L	enzyme	Transferase E.C.2.1.1.43 BRENDA
Gene Ontology	Chain Function Process Component A, Q, M histone methyltransferase ac... C, K L histone methyltransferase ac... N
Primary reference	Structures of human PRC2 with its cofactors AEBP2 and JARID2., Kasinath V, Faini M, Poepsel S, Reif D, Feng XA, Stjepanovic G, Aebersold R, Nogales E, Science. 2018 Jan 18. pii: science.aar5700. doi: 10.1126/science.aar5700. PMID:29348366

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (304 Kb) [Save to disk] Biological Unit Coordinates (6c23.pdb1.gz) 279 Kb LPC: Ligand-Protein Contacts for 6C23 CSU: Contacts of Structural Units for 6C23 Retrieve 6C23 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6C23 from S2C, [Save to disk]

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Structure-derived information

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Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6c23_E] [6c23_B] [6c23_Z] [6c23_N] [6c23_P] [6c23_M] [6c23_C] [6c23_L] [6c23_O] [6c23_A] [6c23_K] [6c23_Q] SWISS-PROT database: Domain organization of by SWISSPFAM

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