6CKV Apoptosis date Mar 01, 2018
title Solution Nmr Structure Of Human Bok
authors C.R.Grace, J.Zheng, T.Moldoveanu
compound source
Molecule: Bcl-2-Related Ovarian Killer Protein
Chain: A
Fragment: Residues 21-177
Synonym: Hbok,Bcl-2-Like Protein 9,Bcl2-L-9
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bok, Bcl2l9
Expression_system: Escherichia Coli 536
Expression_system_taxid: 362663
methodSolution NMR

Primary referenceIntrinsic Instability of BOK Enables Membrane Permeabilization in Apoptosis., Zheng JH, Grace CR, Guibao CD, McNamara DE, Llambi F, Wang YM, Chen T, Moldoveanu T, Cell Rep. 2018 May 15;23(7):2083-2094.e6. doi: 10.1016/j.celrep.2018.04.060. PMID:29768206
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (817 Kb) [Save to disk]
  • Biological Unit Coordinates (6ckv.pdb1.gz) 42 Kb
  • CSU: Contacts of Structural Units for 6CKV
  • Original NMR restraints for 6CKV from PDB
  • Retrieve 6CKV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6CKV from S2C, [Save to disk]
  • View 6CKV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6CKV
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6ckv from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ckv_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6CKV
  • Community annotation for 6CKV at PDBWiki (http://pdbwiki.org)

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