6FY5	Dna Binding Protein	date	Mar 10, 2018
title	Crystal Structure Of The Macro Domain Of Human Macroh2a2
authors	M.Hothorn
compound		source
Molecule: Core Histone Macro-H2a.2 Chain: A, B Synonym: Mh2a2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: H2afy2, Macroh2a2 Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_vector_type: Plasmid Expression_system_plasmid: Petm11
symmetry	Space Group: P 1 21 1	R_factor 0.215 R_Free 0.244
crystal cell	length a length b length c angle alpha angle beta angle gamma 57.750 41.370 84.150 90.00 97.05 90.00
method	X-Ray Diffraction	resolution	1.65 Å
ligand	ACT, EDO	enzyme
Primary reference	MacroH2A histone variants limit chromatin plasticity through two distinct mechanisms., Kozlowski M, Corujo D, Hothorn M, Guberovic I, Mandemaker IK, Blessing C, Sporn J, Gutierrez-Triana A, Smith R, Portmann T, Treier M, Scheffzek K, Huet S, Timinszky G, Buschbeck M, Ladurner AG, EMBO Rep. 2018 Sep 3. pii: embr.201744445. doi: 10.15252/embr.201744445. PMID:30177554

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk] Biological Unit Coordinates (6fy5.pdb1.gz) 34 Kb Biological Unit Coordinates (6fy5.pdb2.gz) 32 Kb LPC: Ligand-Protein Contacts for 6FY5 CSU: Contacts of Structural Units for 6FY5 Structure Factors (2004 Kb) Retrieve 6FY5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6FY5 from S2C, [Save to disk]

View 6FY5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6FY5

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6fy5_B] [6fy5_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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Community annotation for 6FY5 at PDBWiki (http://pdbwiki.org)

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