6HKP Gene Regulation date Sep 07, 2018
title Factor Inhibiting Hif (Fih) In Complex With Zinc, Nog And As 992)
authors T.M.Leissing, I.J.Clifton, X.Lu, C.J.Schofield
compound source
Molecule: Hypoxia-Inducible Factor 1-Alpha Inhibitor
Chain: A
Synonym: Factor Inhibiting Hif-1,Fih-1,Hypoxia-Inducible Fa Asparagine Hydroxylase;
Ec: 1.14.11.30,1.14.11.-
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hif1an, Fih1
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Apoptosis-Stimulating Of P53 Protein 2
Chain: S
Synonym: Bcl2-Binding Protein,Bbp,Renal Carcinoma Antigen N Tumor Suppressor P53-Binding Protein 2,P53bp2;
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 41 21 2
R_factor 0.176 R_Free 0.195
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.020 86.020 148.508 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand GOL, OGA, SO4, ZN enzyme Oxidoreductase E.C.1.14.11.30 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (128 Kb) [Save to disk]
  • Biological Unit Coordinates (6hkp.pdb1.gz) 242 Kb
  • LPC: Ligand-Protein Contacts for 6HKP
  • CSU: Contacts of Structural Units for 6HKP
  • Structure Factors (1223 Kb)
  • Retrieve 6HKP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6HKP from S2C, [Save to disk]
    • View 6HKP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6HKP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6hkp_A] [6hkp_S]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6HKP
  • Community annotation for 6HKP at PDBWiki (http://pdbwiki.org)

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