6INO Immune System date Oct 26, 2018
title Crystal Structure Of The Cysr-Ctld2 Fragment Of Human Mr At (Ph 4.6)
authors Z.Hu, Y.He
compound source
Molecule: Macrophage Mannose Receptor 1
Chain: A, B
Synonym: Mmr,C-Type Lectin Domain Family 13 Member D,C-Type Domain Family 13 Member D-Like,Human Mannose Receptor,Hmr,M Mannose Receptor 1-Like Protein 1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mrc1, Clec13d, Clec13dl, Mrc1l1
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
symmetry Space Group: C 1 2 1
R_factor 0.177 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
238.484 74.394 108.756 90.00 114.24 90.00
method X-Ray Diffractionresolution 3.05 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk]
  • Biological Unit Coordinates (6ino.pdb1.gz) 75 Kb
  • Biological Unit Coordinates (6ino.pdb2.gz) 76 Kb
  • CSU: Contacts of Structural Units for 6INO
  • Structure Factors (214 Kb)
  • Retrieve 6INO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6INO from S2C, [Save to disk]
  • View 6INO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6INO
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6ino from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ino_B] [6ino_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6INO
  • Community annotation for 6INO at PDBWiki (http://pdbwiki.org)

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