6K0X Gene Regulation date May 07, 2019
title Structure Of N6amt1-Trmt112 Complex With Sam
authors Q.Guo, S.Liao, C.Xu, Structural Genomics Consortium (Sgc)
compound source
Molecule: Methyltransferase N6amt1
Chain: A
Ec: 2.1.1.-,2.1.1.72
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: N6amt1
Expression_system: Escherichia Coli-Pichia Pastoris Shuttle Ppparg4;
Expression_system_taxid: 1182032

Molecule: Multifunctional Methyltransferase Subunit Trm112- Protein;
Chain: B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Trmt112
Expression_system: Escherichia Coli-Pichia Pastoris Shuttle Ppparg4;
Expression_system_taxid: 1182032
symmetry Space Group: P 61 2 2
R_factor 0.174 R_Free 0.214
crystal
cell
length a length b length c angle alpha angle beta angle gamma
109.607 109.607 130.368 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.20 Å
ligand SAM enzyme Transferase E.C.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (6k0x.pdb1.gz) 103 Kb
  • LPC: Ligand-Protein Contacts for 6K0X
  • CSU: Contacts of Structural Units for 6K0X
  • Structure Factors (552 Kb)
  • Retrieve 6K0X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6K0X from S2C, [Save to disk]
    • View 6K0X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6K0X
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6k0x_A] [6k0x_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6K0X
  • Community annotation for 6K0X at PDBWiki (http://pdbwiki.org)

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