6K67 Structural Protein date Jun 01, 2019
title Application Of Anti-Helix Antibodies In Protein Structure Determination (9011-3lrh)
authors J.O.Lee, M.S.Jin, J.W.Kim, S.Kim, H.Lee, G.Y.Cho
compound source
Molecule: 3lrh Introbody
Chain: A, C
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Engineered Calmodulin
Chain: B, D
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: H 3
R_factor 0.203 R_Free 0.237
crystal
cell
length a length b length c angle alpha angle beta angle gamma
115.298 115.298 93.275 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.95 Å
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk]
  • Biological Unit Coordinates (6k67.pdb1.gz) 34 Kb
  • Biological Unit Coordinates (6k67.pdb2.gz) 33 Kb
  • LPC: Ligand-Protein Contacts for 6K67
  • CSU: Contacts of Structural Units for 6K67
  • Structure Factors (693 Kb)
  • Retrieve 6K67 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6K67 from S2C, [Save to disk]
  • View 6K67 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6K67
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6k67 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6k67_C] [6k67_D] [6k67_A] [6k67_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6K67
  • Community annotation for 6K67 at PDBWiki (http://pdbwiki.org)

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