6K72 Translation date Jun 05, 2019
title Eif2(Ap) - Eif2b Complex
authors K.Kashiwagi, T.Yokoyama, T.Ito
compound source
Molecule: Translation Initiation Factor Eif-2b Subunit Alph
Chain: A, B
Synonym: Eif-2b Gdp-Gtp Exchange Factor Subunit Alpha
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Eif2b1, Eif2ba
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Translation Initiation Factor Eif-2b Subunit Beta
Chain: C, D
Synonym: S20i15,S20iii15,Eif-2b Gdp-Gtp Exchange Factor Sub
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Eif2b2, Eif2bb
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Translation Initiation Factor Eif-2b Subunit Gamm
Chain: E, F
Synonym: Eif2bg,Eif-2b Gdp-Gtp Exchange Factor Subunit Gamm
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Eif2b3
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Translation Initiation Factor Eif-2b Subunit Delt
Chain: G, H
Synonym: Eif-2b Gdp-Gtp Exchange Factor Subunit Delta
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Eif2b4, Eif2bd
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Translation Initiation Factor Eif-2b Subunit Epsi
Chain: I, J
Synonym: Eif-2b Gdp-Gtp Exchange Factor Subunit Epsilon
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Eif2b5, Eif2be
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Eukaryotic Translation Initiation Factor 2 Subuni
Chain: K, L
Synonym: Eukaryotic Translation Initiation Factor 2 Subunit Eif-2alpha;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Eif2s1, Eif2a
Expression_system: Homo Sapiens
Expression_system_taxid: 9606

Molecule: Eukaryotic Translation Initiation Factor 2 Subuni
Chain: M
Synonym: Eukaryotic Translation Initiation Factor 2 Subunit 2-Beta;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Eif2s2, Eif2b
Expression_system: Homo Sapiens
Expression_system_taxid: 9606

Molecule: Eukaryotic Translation Initiation Factor 2 Subuni
Chain: P
Synonym: Eukaryotic Translation Initiation Factor 2 Subunit Eif-2gx;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Eif2s3, Eif2g
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 4.60 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


C, D


F, E


H, G


J, I


K, L


M


P


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (597 Kb) [Save to disk]
  • Biological Unit Coordinates (6k72.pdb1.gz) 584 Kb
  • CSU: Contacts of Structural Units for 6K72
  • Retrieve 6K72 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6K72 from S2C, [Save to disk]
    • View 6K72 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6K72
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6k72_L] [6k72_F] [6k72_H] [6k72_A] [6k72_K] [6k72_B] [6k72_M] [6k72_E] [6k72_I] [6k72_J] [6k72_P] [6k72_C] [6k72_D] [6k72_G]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6K72
  • Community annotation for 6K72 at PDBWiki (http://pdbwiki.org)

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