6K7V Signaling Protein date Jun 09, 2019
title Structure Of Nlrp1 Card Filament
authors Q.Gong, C.Xu, J.Zhang, B.Wu
compound source
Molecule: Nacht, Lrr And Pyd Domains-Containing Protein 1
Chain: J, A, B, C, D, E, F, G, H, I, K, L
Synonym: Caspase Recruitment Domain-Containing Protein 7,De Effector Filament-Forming Ced-4-Like Apoptosis Protein,Nucl Binding Domain And Caspase Recruitment Domain;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nlrp1, Card7, Defcap, Kiaa0926, Nac, Nalp1
Expression_system: Escherichia Coli K-12
Expression_system_taxid: 83333
Expression_system_strain: K-12
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.70 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (388 Kb) [Save to disk]
  • Biological Unit Coordinates (6k7v.pdb1.gz) 378 Kb
  • CSU: Contacts of Structural Units for 6K7V
  • Retrieve 6K7V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6K7V from S2C, [Save to disk]
  • View 6K7V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6K7V
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6k7v from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6k7v_G] [6k7v_D] [6k7v_B] [6k7v_L] [6k7v_I] [6k7v_H] [6k7v_E] [6k7v_K] [6k7v_J] [6k7v_C] [6k7v_A] [6k7v_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6K7V
  • Community annotation for 6K7V at PDBWiki (http://pdbwiki.org)

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