6KVF Immune System date Sep 04, 2019
title Structure Of Anti-Hcxcr2 Abn48 In Complex With Its Cxcr2 Epi
authors J.C.Xiang, L.Yan, B.Yang, I.A.Wilson
compound source
Molecule: Heavy Chain
Chain: H, A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Homo Sapiens
Expression_system_taxid: 9606

Molecule: Light Chain
Chain: L, C
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Homo Sapiens
Expression_system_taxid: 9606

Molecule: Peptide From C-X-C Chemokine Receptor Type 2
Chain: b, B
Synonym: Cxcr2 Peptide
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: C 1 2 1
R_factor 0.228 R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
159.509 76.082 85.364 90.00 108.53 90.00
method X-Ray Diffractionresolution 2.79 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (135 Kb) [Save to disk]
  • Biological Unit Coordinates (6kvf.pdb1.gz) 66 Kb
  • Biological Unit Coordinates (6kvf.pdb2.gz) 65 Kb
  • CSU: Contacts of Structural Units for 6KVF
  • Structure Factors (600 Kb)
  • Retrieve 6KVF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6KVF from S2C, [Save to disk]
  • View 6KVF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6KVF
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6kvf from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6kvf_b] [6kvf_B] [6kvf_H] [6kvf_C] [6kvf_L] [6kvf_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6KVF
  • Community annotation for 6KVF at PDBWiki (http://pdbwiki.org)

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