6KZO Membrane Protein date Sep 25, 2019
title Membrane Protein
authors N.Yan
compound source
Molecule: Voltage-Dependent T-Type Calcium Channel Subunit
Chain: A
Synonym: Cav3.1c,Nbr13,Voltage-Gated Calcium Channel Subuni Cav3.1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cacna1g, Kiaa1123
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.30 Å
ligand 3PE, CA, NAG, Y01 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • voltage-gated sodium channel...
  • chemical synaptic transmissi...

  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (159 Kb) [Save to disk]
  • Biological Unit Coordinates (6kzo.pdb1.gz) 148 Kb
  • LPC: Ligand-Protein Contacts for 6KZO
  • CSU: Contacts of Structural Units for 6KZO
  • Retrieve 6KZO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6KZO from S2C, [Save to disk]
  • View 6KZO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6KZO
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6kzo from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6kzo_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6KZO
  • Community annotation for 6KZO at PDBWiki (http://pdbwiki.org)

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