6NRA	Chaperone	date	Jan 23, 2019
title	Htric-Hpfd Class1 (No Pfd)
authors	D.R.Gestaut, S.H.Roh, B.Ma, G.Pintilie, L.A.Joachimiak, A.Leitner T.Walzthoeni, R.Aebersold, W.Chiu, J.Frydman
compound		source
Molecule: T-Complex Protein 1 Subunit Alpha Chain: A, I Synonym: Tcp-1-Alpha,Cct-Alpha,Hcct1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tcp1, Cct1, Ccta Expression_system: Insect Cell Expression Vector Ptie1 Expression_system_taxid: 266783
Molecule: T-Complex Protein 1 Subunit Beta Chain: B, J Synonym: Tcp-1-Beta,Cct-Beta,Hcct2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cct2, 99d8.1, Cctb Expression_system: Insect Cell Expression Vector Ptie1 Expression_system_taxid: 266783
Molecule: T-Complex Protein 1 Subunit Gamma Chain: C, K Synonym: Tcp-1-Gamma,Cct-Gamma,Htric5,Hcct3 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cct3, Cctg, Tric5 Expression_system: Insect Cell Expression Vector Ptie1 Expression_system_taxid: 266783
Molecule: T-Complex Protein 1 Subunit Delta Chain: D, L Synonym: Tcp-1-Delta,Cct-Delta,Stimulator Of Tar Rna-Bindin Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cct4, Cctd, Srb Expression_system: Insect Cell Expression Vector Ptie1 Expression_system_taxid: 266783
Molecule: T-Complex Protein 1 Subunit Epsilon Chain: E, M Synonym: Tcp-1-Epsilon,Cct-Epsilon,Hcct5 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cct5, Ccte, Kiaa0098 Expression_system: Insect Cell Expression Vector Ptie1 Expression_system_taxid: 266783
Molecule: T-Complex Protein 1 Subunit Zeta Chain: F, N Synonym: Tcp-1-Zeta,Acute Morphine Dependence-Related Prote Zeta-1,Htr3,Tcp20,Hcct6; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cct6a, Cct6, Cctz Expression_system: Insect Cell Expression Vector Ptie1 Expression_system_taxid: 266783
Molecule: T-Complex Protein 1 Subunit Eta Chain: G, O Synonym: Tcp-1-Eta,Cct-Eta,Hiv-1 Nef-Interacting Protein,Hc Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cct7, Ccth, Nip7-1 Expression_system: Insect Cell Expression Vector Ptie1 Expression_system_taxid: 266783
Molecule: T-Complex Protein 1 Subunit Theta Chain: H, P Synonym: Tcp-1-Theta,Cct-Theta,Chaperonin Containing T-Comp Polypeptide 1 Subunit 8,Renal Carcinoma Antigen Ny-Ren-15,H Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cct8, C21orf112, Cctq, Kiaa0002 Expression_system: Insect Cell Expression Vector Ptie1 Expression_system_taxid: 266783
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	7.70 Å
Gene Ontology	Chain Function Process Component A, I E, M F, N J, B K, C L, D O, G P, H
Primary reference	The Chaperonin TRiC/CCT Associates with Prefoldin through a Conserved Electrostatic Interface Essential for Cellular Proteostasis., Gestaut D, Roh SH, Ma B, Pintilie G, Joachimiak LA, Leitner A, Walzthoeni T, Aebersold R, Chiu W, Frydman J, Cell. 2019 Apr 18;177(3):751-765.e15. doi: 10.1016/j.cell.2019.03.012. Epub 2019 , Apr 4. PMID:30955883

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1057 Kb) [Save to disk] Biological Unit Coordinates (6nra.pdb1.gz) 1051 Kb CSU: Contacts of Structural Units for 6NRA Retrieve 6NRA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6NRA from S2C, [Save to disk]

View 6NRA in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6NRA

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6nra_K] [6nra_O] [6nra_H] [6nra_E] [6nra_J] [6nra_C] [6nra_A] [6nra_I] [6nra_D] [6nra_B] [6nra_M] [6nra_F] [6nra_P] [6nra_G] [6nra_N] [6nra_L] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6NRA

Community annotation for 6NRA at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---