6OF8 Transferase date Mar 28, 2019
title Structure Of Thr354asn, Glu355gln, Thr412asn, Ile414met, Ile And Phe467met Mutant Human Camkii-Alpha Hub Domain
authors E.D.Mcspadden, C.C.Chi, C.L.Gee, J.Kuriyan
compound source
Molecule: Calciumcalmodulin-Dependent Protein Kinase Type Alpha;
Chain: F, B, C, G, E, A, D
Synonym: Camk-II Subunit Alpha
Ec: 2.7.11.17
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Camk2a, Camka, Kiaa0968
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
symmetry Space Group: C 1 2 1
R_factor 0.222 R_Free 0.258
crystal
cell
length a length b length c angle alpha angle beta angle gamma
162.985 121.343 56.239 90.00 108.15 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand GOL, K enzyme Transferase E.C.2.7.11.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, G, E, B


Primary referenceVariation in assembly stoichiometry in non-metazoan homologs of the hub domain of Ca2+/Calmodulin-dependent protein kinase II., McSpadden ED, Xia Z, Chi CC, Susa AC, Shah NH, Gee CL, Williams ER, Kuriyan J, Protein Sci. 2019 Apr 3. doi: 10.1002/pro.3614. PMID:30942928
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk]
  • Biological Unit Coordinates (6of8.pdb1.gz) 305 Kb
  • LPC: Ligand-Protein Contacts for 6OF8
  • CSU: Contacts of Structural Units for 6OF8
  • Structure Factors (2495 Kb)
  • Retrieve 6OF8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6OF8 from S2C, [Save to disk]
  • View 6OF8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6OF8
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6of8 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6of8_E] [6of8_F] [6of8_C] [6of8_A] [6of8_D] [6of8_B] [6of8_G]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6OF8
  • Community annotation for 6OF8 at PDBWiki (http://pdbwiki.org)

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