6ORR Transferase Transferase Inhibitor date Apr 30, 2019
title Co-Crystal Structure Of Human Nicotinamiden-Methyltransferas In Complex With High-Affinity Alkynyl Bisubstrate Inhibitor
authors E.J.May, R.L.Policarpo, R.Gaudet
compound source
Molecule: Nnmt Protein
Chain: A, B, C, D
Synonym: Nicotinamide N-Methyltransferase,Isoform Cra_a
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nnmt, Hcg_39357
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a-Lic
symmetry Space Group: P 1
R_factor 0.222 R_Free 0.263
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.074 62.203 108.202 82.52 81.84 68.35
method X-Ray Diffractionresolution 2.25 Å
ligand GOL, N37 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (361 Kb) [Save to disk]
  • Biological Unit Coordinates (6orr.pdb1.gz) 92 Kb
  • Biological Unit Coordinates (6orr.pdb2.gz) 88 Kb
  • Biological Unit Coordinates (6orr.pdb3.gz) 92 Kb
  • Biological Unit Coordinates (6orr.pdb4.gz) 88 Kb
  • Biological Unit Coordinates (6orr.pdb5.gz) 350 Kb
  • LPC: Ligand-Protein Contacts for 6ORR
  • CSU: Contacts of Structural Units for 6ORR
  • Structure Factors (1743 Kb)
  • Retrieve 6ORR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6ORR from S2C, [Save to disk]
  • View 6ORR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6ORR
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6orr from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6orr_D] [6orr_A] [6orr_B] [6orr_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6ORR
  • Community annotation for 6ORR at PDBWiki (http://pdbwiki.org)

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