6P8E Cell Cycle, Transferase date Jun 07, 2019
title Crystal Structure Of Cdk4 In Complex With Cyclind1 And P27
authors K.Z.Guiley, J.W.Stevenson, K.Lou, K.J.Barkovich, K.Bunch, S.M.Tri K.M.Shokat, S.M.Rubin
compound source
Molecule: G1s-Specific Cyclin-D1
Chain: A
Synonym: B-Cell Lymphoma 1 Protein,Bcl-1,Bcl-1 Oncogene,Pra Oncogene;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ccnd1, Bcl1, Prad1
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Cyclin-Dependent Kinase 4
Chain: B
Synonym: Cell Division Protein Kinase 4,Psk-J3
Ec: 2.7.11.22
Engineered: Yes
Mutation: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cdk4
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: Cyclin-Dependent Kinase Inhibitor 1b
Chain: C
Synonym: Cyclin-Dependent Kinase Inhibitor P27,P27kip1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cdkn1b, Kip1
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 21 2 21
R_factor 0.172 R_Free 0.222
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.410 67.490 187.280 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand MG enzyme Transferase E.C.2.7.11.22 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
B
  • cyclin-dependent protein ser...


  • C


    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (204 Kb) [Save to disk]
  • Biological Unit Coordinates (6p8e.pdb1.gz) 197 Kb
  • LPC: Ligand-Protein Contacts for 6P8E
  • CSU: Contacts of Structural Units for 6P8E
  • Structure Factors (349 Kb)
  • Retrieve 6P8E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6P8E from S2C, [Save to disk]
  • View 6P8E in 3D
  • Proteopedia, because life has more than 2D.
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6P8E
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6p8e from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6p8e_B] [6p8e_A] [6p8e_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6P8E
  • Community annotation for 6P8E at PDBWiki (http://pdbwiki.org)

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