6R4E Transferase date Mar 22, 2019
title Crystal Structure Of Human Gfat-1 In Complex With Glucose-6- And L-Glu
authors S.Ruegenberg, M.Horn, C.Pichlo, K.Allmeroth, U.Baumann, M.S.Denze
compound source
Molecule: Glutamine--Fructose-6-Phosphate Aminotransferase [Isomerizing] 1;
Chain: A, B
Synonym: D-Fructose-6-Phosphate Amidotransferase 1,
Glutamine: Fructose-6-Phosphate Amidotransferase 1,Gfat1, Hexosephosphate Aminotransferase 1;
Ec: 2.6.1.16
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gfpt1, Gfat, Gfpt
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: P 41 21 2
R_factor 0.174 R_Free 0.210
crystal
cell
length a length b length c angle alpha angle beta angle gamma
153.847 153.847 166.292 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.35 Å
ligand G6Q, GLU, SEP enzyme Transferase E.C.2.6.1.16 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (638 Kb) [Save to disk]
  • Biological Unit Coordinates (6r4e.pdb1.gz) 632 Kb
  • LPC: Ligand-Protein Contacts for 6R4E
  • CSU: Contacts of Structural Units for 6R4E
  • Structure Factors (694 Kb)
  • Retrieve 6R4E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6R4E from S2C, [Save to disk]
  • View 6R4E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6R4E
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6r4e from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6r4e_B] [6r4e_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6R4E
  • Community annotation for 6R4E at PDBWiki (http://pdbwiki.org)

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