6SEN Transcription date Jul 30, 2019
title Tead4 Bound To A Fam181a Peptide
authors C.Scheufler, F.Villard
compound source
Molecule: Transcriptional Enhancer Factor Tef-3
Chain: A, B
Synonym: Tea Domain Family Member 4,Tead-4,Transcription Fa Like 1,Transcription Factor Rtef-1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tead4, Rtef1, Tcf13l1, Tef3
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Protein Fam181a
Chain: L, M
Engineered: Yes
Other_details: Fam181a Peptide

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: C 1 2 1
R_factor 0.190 R_Free 0.219
length a length b length c angle alpha angle beta angle gamma
66.490 132.070 62.020 90.00 115.87 90.00
method X-Ray Diffractionresolution 1.65 Å
ligand ACE, MYK, NH2, SO4 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (170 Kb) [Save to disk]
  • Biological Unit Coordinates (6sen.pdb1.gz) 81 Kb
  • Biological Unit Coordinates (6sen.pdb2.gz) 85 Kb
  • LPC: Ligand-Protein Contacts for 6SEN
  • CSU: Contacts of Structural Units for 6SEN
  • Structure Factors (8645 Kb)
  • Retrieve 6SEN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6SEN from S2C, [Save to disk]
  • View 6SEN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6SEN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6sen from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6sen_L] [6sen_B] [6sen_A] [6sen_M]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6SEN
  • Community annotation for 6SEN at PDBWiki (http://pdbwiki.org)

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